Koskamo

preprint-fulltext MCP

An MCP server that retrieves full text from bioRxiv, medRxiv, and arXiv preprints, structuring them into sections like abstract, methods, and results. It unifies data from Europe PMC, openRxiv, and OpenAlex into a canonical JATS parser output, providing embedding-ready JSON or Markdown chunks for LLM scientific reasoning, deep research, and RAG pipelines.

Package and access

Local package with source-attributed installation metadata. Koskamo does not execute packages during review.

preprint-fulltext MCP logo, by genecellCommunity listingLocal stdioSource reviewed; not executedPublished by genecell
Vendor documentation

What you can do with it

  • Ground LLM scientific reasoning with structured preprint sections
  • Perform deep research by reading across many papers' full text
  • Extract methods, protocols, and datasets for analysis
  • Generate embedding-ready chunks for RAG systems

Source and maintenance

Community listingRegistry 0.1.0
mcp-registry: io.github.genecell/preprint-fulltext@0.1.0Source repositoryProject website
Maintenance checked

Packages and installation

Source-provided package data. Koskamo has not executed or live-probed this package.

preprint-fulltext 0.1.0

pypi
preprint-fulltext package definition
{
  "version": "0.1.0",
  "transport": "stdio",
  "identifier": "preprint-fulltext",
  "registryType": "pypi",
  "registryBaseUrl": "https://pypi.org",
  "environmentVariables": [
    {
      "name": "CONTACT_EMAIL",
      "description": "Email for the Europe PMC / OpenAlex polite pools (recommended)."
    },
    {
      "name": "OPENALEX_API_KEY",
      "description": "OpenAlex API key (only needed for OpenAlex discover/search; required by OpenAlex since 2026-02-13)."
    }
  ]
}

Tools

Reported by the attributed source; not independently observed by Koskamo.

No tool definitions available.

Connect from your client

Each snippet configures the same source-provided package; replace placeholders before use.

This server is operated by the named third party. Listing and endpoint checks are not an endorsement or a security audit. Review the operator's permissions, terms, and data handling before connecting. How listings are checked and corrected.

Cursor

Merge this local stdio configuration, replace every placeholder environment value, and restart Cursor. Koskamo has not executed this package.
Cursor configuration
{
  "mcpServers": {
    "preprint-fulltext-mcp": {
      "command": "uvx",
      "args": [
        "preprint-fulltext==0.1.0"
      ],
      "env": {
        "CONTACT_EMAIL": "<YOUR_CONTACT_EMAIL>",
        "OPENALEX_API_KEY": "<YOUR_OPENALEX_API_KEY>"
      }
    }
  }
}

Cline

Merge this local stdio configuration, replace every placeholder environment value, and restart Cline. Koskamo has not executed this package.
Cline configuration
{
  "mcpServers": {
    "preprint-fulltext-mcp": {
      "command": "uvx",
      "args": [
        "preprint-fulltext==0.1.0"
      ],
      "env": {
        "CONTACT_EMAIL": "<YOUR_CONTACT_EMAIL>",
        "OPENALEX_API_KEY": "<YOUR_OPENALEX_API_KEY>"
      }
    }
  }
}

VS Code

Merge this local stdio configuration, replace every placeholder environment value, and restart VS Code. Koskamo has not executed this package.
VS Code configuration
{
  "servers": {
    "preprint-fulltext-mcp": {
      "type": "stdio",
      "command": "uvx",
      "args": [
        "preprint-fulltext==0.1.0"
      ],
      "env": {
        "CONTACT_EMAIL": "<YOUR_CONTACT_EMAIL>",
        "OPENALEX_API_KEY": "<YOUR_OPENALEX_API_KEY>"
      }
    }
  }
}

Claude Desktop

Merge this local stdio configuration, replace every placeholder environment value, and restart Claude Desktop. Koskamo has not executed this package.
Claude Desktop configuration
{
  "mcpServers": {
    "preprint-fulltext-mcp": {
      "command": "uvx",
      "args": [
        "preprint-fulltext==0.1.0"
      ],
      "env": {
        "CONTACT_EMAIL": "<YOUR_CONTACT_EMAIL>",
        "OPENALEX_API_KEY": "<YOUR_OPENALEX_API_KEY>"
      }
    }
  }
}

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