Koskamo

plantcv-mcp

An MCP server that exposes PlantCV as a measurement instrument for plant phenotyping. It allows AI agents to run PlantCV to extract plant traits and returns the segmentation overlay used for measurement. The server includes guards to refuse returning numbers when segmentation is degenerate, ensuring data integrity. It supports measuring up to 200 images with a single recipe and provides diagnostics alongside trait numbers.

Package and access

Local package with source-attributed installation metadata. Koskamo does not execute packages during review.

plantcv-mcp logo, by musharnaCommunity listingLocal stdioSource reviewed; not executedPublished by musharna
Vendor documentation

What you can do with it

  • Run PlantCV plant phenotyping on images
  • Extract plant traits with correct units
  • Get segmentation overlays for measured traits
  • Measure up to 200 images with one recipe

Source and maintenance

Community listingRegistry 1.18.2
mcp-registry: io.github.musharna/plantcv-mcp@1.18.2Source repositoryProject website
Maintenance checked

Packages and installation

Source-provided package data. Koskamo has not executed or live-probed this package.

plantcv-mcp 1.18.2

pypiuvx
plantcv-mcp package definition
{
  "version": "1.18.2",
  "transport": "stdio",
  "identifier": "plantcv-mcp",
  "runtimeHint": "uvx",
  "registryType": "pypi",
  "registryBaseUrl": "https://pypi.org",
  "runtimeArguments": [
    {
      "name": "--python",
      "type": "named",
      "value": "3.13"
    }
  ]
}

Tools

Reported by the attributed source; not independently observed by Koskamo.

No tool definitions available.

Connect from your client

Each snippet configures the same source-provided package; replace placeholders before use.

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Cursor

Merge this local stdio configuration, replace every placeholder environment value, and restart Cursor. Koskamo has not executed this package.
Cursor configuration
{
  "mcpServers": {
    "plantcv-mcp": {
      "command": "uvx",
      "args": [
        "plantcv-mcp==1.18.2"
      ]
    }
  }
}

Cline

Merge this local stdio configuration, replace every placeholder environment value, and restart Cline. Koskamo has not executed this package.
Cline configuration
{
  "mcpServers": {
    "plantcv-mcp": {
      "command": "uvx",
      "args": [
        "plantcv-mcp==1.18.2"
      ]
    }
  }
}

VS Code

Merge this local stdio configuration, replace every placeholder environment value, and restart VS Code. Koskamo has not executed this package.
VS Code configuration
{
  "servers": {
    "plantcv-mcp": {
      "type": "stdio",
      "command": "uvx",
      "args": [
        "plantcv-mcp==1.18.2"
      ]
    }
  }
}

Claude Desktop

Merge this local stdio configuration, replace every placeholder environment value, and restart Claude Desktop. Koskamo has not executed this package.
Claude Desktop configuration
{
  "mcpServers": {
    "plantcv-mcp": {
      "command": "uvx",
      "args": [
        "plantcv-mcp==1.18.2"
      ]
    }
  }
}

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