An MCP server provided by Pipeworx that exposes the Human Phenotype Ontology (HPO) API. It allows AI agents to look up phenotype terms, disease-phenotype associations, and gene-disease relationships for clinical genomics through seven specific tools including term lookup, search, and hierarchy navigation.
- Operator: Pipeworx
- Endpoint: https://gateway.pipeworx.io/hpo-api/mcp
- Transport: streamable-http
- Sign-in: No sign-in
- Category: AI and machine learning
- Use cases: Look up HPO terms by ID; Search for phenotype terms using text; Retrieve direct children or parents of a term; Find diseases associated with a specific gene
- Tools: ask_pipeworx, ask_pipeworx_beta, ask_pipeworx_grounded, search_within, deep_research, discover_tools, resolve_entity, compare_entities, subscribe, unsubscribe, list_subscriptions, recent_alerts, entity_profile, recent_changes, validate_claim, company_facts, scan_dependency, bet_research, polymarket_arbitrage, polymarket_edges, polymarket_kalshi_spread, polymarket_fill_risk, polymarket_edge_tracker, kalshi_weather_edge, resolution_audit, resolution_diff, release_calendar_markets, archive_evidence, archive_compare, research_row, classify_row, pipeworx_trending, suggest_questions, generate_llms_txt, ai_visibility_check, scan_competitor_ai_presence, pipeworx_feedback, remember, recall, forget, term, search, term_children, term_parents, term_descendants, gene_diseases, disease_phenotypes
- Documentation: https://pipeworx.io/packs/hpo-api
- Directory listing: https://koskamo.com/explore/hpo-api-mcp
- Also known as: HPO API MCP MCP; hpo-api-mcp